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structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP INOSINE SUBSTITUTED DNA F28- DI (AAATTTGTTTGAICITTGAGCAAATTT)
(DNA-binding protein fis)
referenceHancock et al. 'Nucleic 41 6750 2013
sourceEscherichia coli
experimentX-ray (resolution=2.70, R-factor=0.225)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTRK

Estimated binding specificities ?

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# IC=4.434 IC/col=0.739 n_of_columns=6 specificity:   
A |   0   0  13  24  13  96
C |   0   0  54  24  54   0
G |   0  96  16  24  16   0
T |  96   0  13  24  13   0
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updated Mon Dec 16 23:34:15 2024