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legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP 2-AMINOPURINE SUBSTITUTED DNA F28-2AP (AAATTTGTTTGA2T2TTGAGCAAATTT)
(DNA-binding protein fis)
referenceHancock et al. 'Nucleic 41 6750 2013
sourceEscherichia coli
experimentX-ray (resolution=2.80, R-factor=0.220)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

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# IC=3.968 IC/col=0.794 n_of_columns=5 specificity:   
A |   0   0   9   9   9
C |   0   0   9   9  11
G |   0  96  11  11   9
T |  96   0  67  67  67
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updated Mon Dec 16 23:34:24 2024