interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8G (AAATTGGTTTGAATTTTGAGCCAATTT)
(DNA-binding protein Fis)
referenceHancock et al. 'Plos 11 e0150189 2016
sourceEscherichia coli
experimentX-ray (resolution=2.66, R-factor=0.214)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRTR

Estimated binding specificities ?

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# IC=4.007 IC/col=0.668 n_of_columns=6 specificity:   
A |   9   0  11  24   9  96
C |   9   0  67  24  67   0
G |  69  96   9  24   9   0
T |   9   0   9  24  11   0
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updated Tue Dec 17 01:32:36 2024