interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT)
(DNA-binding protein Fis)
referenceHancock et al. 'Plos 11 e0150189 2016
sourceEscherichia coli
experimentX-ray (resolution=2.89, R-factor=0.182)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRK

Estimated binding specificities ?

contactlogo
# IC=4.062 IC/col=0.677 n_of_columns=6 specificity:   
A |   0   7  24  22   0   0
C |  88   7  24  16  96   7
G |   0  75  24  51   0   7
T |   8   7  24   7   0  82
scan!

home
updated Tue Dec 17 01:32:49 2024