interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F31 (AAATTTGTAGGAATTTTCTGCAAATTT)
(DNA-binding protein Fis)
referenceHancock et al. 'Plos 11 e0150189 2016
sourceEscherichia coli
experimentX-ray (resolution=2.66, R-factor=0.218)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

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# IC=4.434 IC/col=0.739 n_of_columns=6 specificity:   
A |   0   0  16  24  13  96
C |   0   0  54  24  13   0
G |   0  96  13  24  54   0
T |  96   0  13  24  16   0
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updated Tue Dec 17 01:32:58 2024