interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
(DNA-binding protein Fis)
referenceHancock et al. 'Plos 11 e0150189 2016
sourceEscherichia coli
experimentX-ray (resolution=2.78, R-factor=0.222)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRR

Estimated binding specificities ?

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# IC=4.007 IC/col=0.668 n_of_columns=6 specificity:   
A |   9  11  24   9   0  96
C |  67  67  24  69  96   0
G |   9   9  24   9   0   0
T |  11   9  24   9   0   0
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updated Tue Dec 17 01:33:11 2024