| structure name | CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2 (CAATENHANCER BINDING PROTEIN BETA) |
| reference | Tahirov et al. |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.45, R-factor=0.229) |
| structural superfamily | Leucine zipper domain; |
| sequence family | Basic region leucine zipper; |
| multimeric complexes | 1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB |
| reference complex | 6mg1_B |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RNAVSR |
Estimated binding specificities ?
| readout + contact |  |
A | 6 0 5 5 19 C | 6 13 7 81 19 G | 6 1 71 5 42 T | 78 82 13 5 16scan! |
Dendrogram of similar interfaces ?
matrix format------------RG------NC----YGATRC L +4eot_A +------1 --RG--NC----YGAT----CTRG-------- L +------------5 +2wt7_B ! ! QG----QC----FTRC---------------- L ! +-------7aw7_D +--------6 ------NT----ATAT----STRG-------- L ! ! +1dh3_C ! ! +---2 ----RA----NT----AAVT----STRG---- L ! ! ! +1hjb_A --7 +---------------4 ------NC----AT------STRA-------- ! ! +-1a02_J ! +--3 ------NCTT----AT------RG-------- L ! +-2dgc_A ! --------NCRT--ATAT----STRG------ +-----------------------------1t2k_D |
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updated Thu Sep 12 14:42:25 2024