8sp0_E : 3D-footprint complex

structure name	SYMMETRIC DIMER OF MAPSPARTA BOUND WITH GRNA/TDNA HYBRID
experiment	NMR
structural superfamily	Toll/Interleukin receptor TIR domain;
multimeric complexes	8ffi_AB 8ffi_EF 8ffi_IL 8ffi_MN 8i87_AB 8i87_CD 8i87_FG 8i87_OT 8oz6_AB 8oz6_CD 8oz6_EF 8oz6_GH 8ozd_AB 8ozd_CD 8oze_EF 8oze_GH 8ozf_AB 8ozf_CE 8ozf_FG 8ozf_HM 8ozg_AB 8ozg_CE 8ozg_FG 8ozg_HM 8ozi_AB 8ozi_CD 8ozi_EF 8ozi_GH 8sp0_AB 8sp0_EF 8sp3_AB 8sp3_EF 8spo_AB 8spo_EF 8spo_IL 8spo_MN 8squ_AB
reference complex	8ffi_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8sp0_E interface=262,357,361, rnkifishatpddndftrwlalkliglgyevwcdilfldkgvdfwsniekviredtckfllvsssysnqregvlkelavaakvkkqlkddkfiiplaideqlsyddinidivrlnaidfkmswarglkdileafekqkvpkevadasksnllyqqiflhdksviekeeiydsnwlsilsfpeelrfheynwmlpkrfdvreltfpavryknylctfawaydftyhlpktetyhksktiripteeilsgsydsnfirnaeckRlivqllnkafelrmkdkevqeyemsnktaywlekgklekdkfektmlvgkqkdknwhfaisgasklypfpvlmisshifftadgkklidsssvqHssrRrqgknwwnntwrtkllafikylsdddtsfylemgseekvfvsnepvkfkgnvsynipe
interface signature	RHR

Estimated binding specificities ?

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# IC=2.661 IC/col=0.242 n_of_columns=11

specificity:

A |  96  24  24  24  24  24  24  24   9  19   0
C |   0  24  24  24  24  24  24  24   0  48  57
G |   0  24  24  24  24  24  24  24  78   9  19
T |   0  24  24  24  24  24  24  24   9  20  20

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updated Fri Sep 13 13:31:44 2024