interface graph thumbnail
legend  pdf

structure nameGR DNA BINDING DOMAIN:CGT COMPLEX
(Glucocorticoid receptor)
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=1.63, R-factor=0.198)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1glu_AB 1r4o_AB 1r4r_AB 3fyl_AB 3g6p_AB 3g6q_AB 3g6r_AB 3g6u_AB 3g8u_AB 3g8x_AB 3g97_AB 3g99_AB 3g9i_AB 3g9j_AB 3g9m_AB 3g9o_AB 3g9p_AB 5va0_AB 5va7_AB 6bse_AB 6x6d_AB 6x6e_AB
reference complex3g9m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHKVR

Estimated binding specificities ?

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# IC=4.007 IC/col=0.668 n_of_columns=6 specificity:   
A |   9   9  24  67   0  96
C |  69   9  24  11  96   0
G |   9  67  24   9   0   0
T |   9  11  24   9   0   0
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updated Mon Dec 16 20:50:54 2024