interface graph thumbnail
legend  pdf

structure nameGR DNA BINDING DOMAIN:FKBP5 COMPLEX-52, 18BP
(Glucocorticoid receptor)
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=2.30, R-factor=0.192)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1glu_AB 1r4o_AB 1r4r_AB 3fyl_AB 3g6p_AB 3g6q_AB 3g6r_AB 3g6t_AB 3g6u_AB 3g8u_AB 3g8x_AB 3g97_AB 3g99_AB 3g9i_AB 3g9j_AB 3g9m_AB 3g9o_AB 3g9p_AB 4hn5_AB 4hn6_AB 5cbx_AB 5cbx_EF 5cby_AB 5cc1_AB 5cc1_WX 5e69_AB 5e6a_AB 5e6b_AB 5e6c_AB 5emc_AB 5emp_AB 5emq_AB 5va0_AB 5va7_AB 6bse_AB 6x6d_AB 6x6e_AB
reference complex3g9m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVRR

Estimated binding specificities ?

contactlogo
# IC=3.142 IC/col=0.628 n_of_columns=5 specificity:   
A |  13   0   0  24  13
C |  13   0   0  24  57
G |  16  96   0  24  13
T |  54   0  96  24  13
scan!

home
updated Thu Jan 8 21:33:26 2026