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structure nameINTRON ENCODED HOMING ENDONUCLEASE I-PPOI/DNA COMPLEX LACKING CATALYTIC METAL ION
(INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI)
referenceStoddard et al. Nat.Struct.Biol. 6 1096 1999
sourcePhysarum polycephalum
experimentX-ray (resolution=2.10, R-factor=0.191)
structural superfamilyHis-Me finger endonucleases;
multimeric complexes1a74_AB 1cyq_AB 1cz0_AB 1ipp_AB 2o6m_AB 8vmo_AB 8vmp_AB 8vmq_AB 8vmr_AB 8vms_AB 8vmt_AB 8vmu_AB 8vmv_AB 8vmw_AB 8vmx_AB 8vmy_AB 8vmz_AB 8vn0_AB 8vn1_AB 8vn2_AB 8vn3_AB 8vn4_AB 8vn5_AB 8vn6_AB 8vn7_AB 8vn8_AB 8vn9_AB 8vna_AB 8vnb_AB 8vne_AB 8vnf_AB 8vng_AB 8vnh_AB 8vnj_AB 8vnk_AB 8vnl_AB 8vnm_AB 8vnn_AB 8vno_AB 8vnp_AB 8vnq_AB 8vnr_AB 8vns_AB 8vnt_AB 8vnu_AB
reference complex8vms_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureANRQKTRLK

Estimated binding specificities ?

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# IC=8.423 IC/col=0.936 n_of_columns=9 specificity:   
A |   3  19   0   0   4   3  15   3   3
C |   1   3  96   0  92   3  71  17   5
G |  92  65   0   0   0   3   7  11   0
T |   0   9   0  96   0  87   3  65  88
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updated Mon Dec 16 17:44:03 2024