1ipp_A : 3D-footprint complex

structure name	HOMING ENDONUCLEASE/DNA COMPLEX (INTRON-ENCODED ENDONUCLEASE I-PPOI)
reference	Monnat Jr. et al.
source	Physarum polycephalum
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	His-Me finger endonucleases;
multimeric complexes	1a74_AB 1cyq_AB 1cz0_AB 1ipp_AB 2o6m_AB
reference complex	8vms_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1ipp_A interface=54,56,60,62,64,66,71,73,115,119, altnaqilavidsweetvgqfpvithhvplggglqgtlhcyeiplaapygvgfAkNgptRwQyKrTinqvVhRwgshtvpfllepdningktctashlchntrchnplhlcwesLddnKgrnwcpgpnggcvhavvclrqgplygpgatvagpqqrgshfvv
interface signature	ANRQKTVRLK

Estimated binding specificities ?

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# IC=9.664 IC/col=0.966 n_of_columns=10

specificity:

A |  96  72  12  72  84  96   0   6   0  96
C |   0   6  18  12   0   0   0  60  96   0
G |   0  12  66   6  12   0  96   6   0   0
T |   0   6   0   6   0   0   0  24   0   0

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updated Thu Sep 12 14:45:20 2024