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legend  pdf

structure nameHOMING ENDONUCLEASE I-PPOI-DNA COMPLEX:REACTION AT PH6.0 (K+ MES) WITH 500 UM MG2+ FOR 40S
(Intron-encoded endonuclease I-PpoI)
referenceChang et al. 'To ? ? ?
sourcePhysarum polycephalum
experimentX-ray (resolution=1.57, R-factor=0.181)
structural superfamilyHis-Me finger endonucleases;
multimeric complexes1a74_AB 1cyq_AB 1cz0_AB 1ipp_AB 2o6m_AB
reference complex8vms_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureANRQKTVRLK

Estimated binding specificities ?

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# IC=8.332 IC/col=0.926 n_of_columns=9 specificity:   
A |  96  60   5  53   0  96   0  10   0
C |   0   5  12  10   0   0   0  64  96
G |   0  10  74  28  96   0  96   6   0
T |   0  21   5   5   0   0   0  16   0
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updated Fri Sep 13 14:26:35 2024