7yrd_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HISTONE METHYLTRANSFERASE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
redundant complexes	7yrg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yrd_A interface=5,8,30,48, kkphRyrPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera

  
  RG--------                                 +8jh2_e    
                             +---------------3 
  RG--RT----       +---------8               +8grq_A    
                   !         ! 
  RGLCRT----       !         +---------------8hr1_E    
                   !  
  ----RA----       !                       +--7xsx_a    
                   !          +------------5 
  ------RA--       !          !            +--6g0l_D    
                   !          ! 
  ----RA----     -12     +----9               +1zla_C    
                   !     !    ! +-------------4 
  ----RA--RA       !     !    ! !             +6a5l_g    
                   !     !    +-7 
  ----RG----       !  +-10      !              +8txv_G    
                   !  !  !      +--------------1 
  ----RG----       !  !  !                     +8ox0_C    
                   !  !  !  
  ----RG----       +-11  +--------------------8jla_C    
                      !  
  ----RT----          !                      +8u14_G    
                      !       +--------------2 
  ----RG----          +-------6              +5x0y_G    
                              ! 
  ----RG----                  +--------------7e9c_G

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updated Wed Dec 18 14:36:12 2024