7yrd_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HISTONE METHYLTRANSFERASE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yrd_A interface=5,8,30,48, kkphRyrPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera

  
  --RA----LT----RG                                   +8eue_E    
                                                     ! 
  HGRTYT------RG--                         +---------3   +7k6p_A    
                                           !         ! +-1 
  --RT--RG--------                         !         +-2 +6pww_K    
                                +----------6           ! 
  HTRA----LT--RC--              !          !           +5xm1_A    
                                !          ! 
  --RGYA------RT--              !          !    +-----7wlr_E    
                             +--7          +----4 
  ------------RA--           !  !               +-----7xsx_a    
                             !  ! 
  ----------IT----         +-8  !            +--------6r8y_H    
                           ! !  +------------5 
  ------------RT--         ! !               +--------7lyb_G    
                         +-9 ! 
  ------------RG--       ! ! +------------------------5t5k_E    
                       -10 ! 
  ------------RA--       ! +------------------------6t7a_C    
                         !  
  ------------RG--       +-------------------------7e9c_G

home
updated Wed Dec 20 00:05:45 2023