7yrd_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HISTONE METHYLTRANSFERASE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
redundant complexes	7yrg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yrd_A interface=5,8,30,48, kkphRyrPgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirgera

  
  RG--RT----       +-----------------------------8grq_A    
                   !  
  RG--------       !                            +8jh2_e    
                   !     +----------------------4 
  RGLCRT----       !     !                      +8hr1_E    
                   !     !  
  ----RA----       !     !                      +--7xsx_a    
                   !     !        +-------------5 
  ------RA--     -12  +-10        !             +--6g0l_D    
                   !  !  !      +-8 
  ----RA----       !  !  !      ! !               +1zla_C    
                   !  !  !      ! +---------------3 
  ----RA--RA       !  !  !      !                 +6a5l_g    
                   !  !  !      ! 
  ----RG----       !  !  +------9                  +8txv_G    
                   !  !         !   +--------------1 
  ----RG----       +-11         !   !              +8ox0_C    
                      !         ! +-6 
  ----RT----          !         ! ! !              +8u14_G    
                      !         +-7 +--------------2 
  ----RG----          !           !                +5x0y_G    
                      !           ! 
  ----RG----          !           +--------------8jla_C    
                      !  
  ----RG----          +--------------------------7e9c_G

home
updated Sun Aug 3 21:42:10 2025