3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

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updated Mon Jun 29 00:05:11 2026

structure name	CRYO-EM STRUCTURE OF NUCLEOSOME CORE PARTICLE COMPOSED OF THE WIDOM 601 DNA SEQUENCE (HISTONE H3.2)
source	XENOPUS LAEVIS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	1aoi_ABCDEFGH 1kx3_ABCDEFGH 1kx4_ABCDEFGH 1kx5_ABCDEFGH 1m18_ABCDEFGH 1m19_ABCDEFGH 1m1a_ABCDEFGH 1p3b_ABCDEFGH 1p3f_ABCDEFGH 1p3g_ABCDEFGH 1p3i_ABCDEFGH 1p3o_ABCDEFGH 1p3p_ABCDEFGH 1s32_ABCDEFGH 1zbb_ABCDEFGHabcdefgh 2fj7_ABCDEFGH 2nzd_ABCDEFGH 3b6f_ABCDEFGH 3b6g_ABCDEFGH 3c1b_ABCDEFGH 3kuy_ABCDEFGH 3kwq_ABCDEFGH 3kxb_ABCDEFGH 3lja_ABCDEFGH 3lz0_ABCDEFGH 3lz1_ABCDEFGH 3mgp_ABCDEFGH 3mgq_ABCDEFGH 3mgr_ABCDEFGH 3mgs_ABCDEFGH 3mnn_ABCDEFGH 3mvd_ABCDEFGHKL 3o62_ABCDEFGH 3reh_ABCDEFGH 3rei_ABCDEFGH 3rej_ABCDEFGH 3rek_ABCDEFGH 3rel_ABCDEFGH 3tu4_ABCDEFGHKL 3ut9_ABCDEFGH 3uta_ABCDEFGH 3utb_ABCDEFGH 4j8u_ABCDEFGH 4j8v_ABCDEFGH 4j8w_ABCDEFGH 4j8x_ABCDEFGH 4r8p_ABCDEFGHL 4wu8_ABCDEFGH 4wu9_ABCDEFGH 4xuj_ABCDEFGH 4xzq_ABCDEFGH 4ys3_ABCDEFGH 4z66_ABCDEFGH 5cp6_ABCDEFGH 5dnm_ABCDEFGH 5dnn_ABCDEFGH 5hq2_ABGH 5mlu_ABCDEFGH 5nl0_ABCDEFGHZ 5nl0_KLMN 5oxv_ABCDEFGHKLMNOPQR 5oy7_ABCDEFGHIJKLMNOPQRSTUVWXYZabcdef 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 5xf6_ABCDEFGH 5z3l_ABCDEFGHO 5z3o_ABCDEFGHO 5z3u_ABCDEFGHO 5z3v_ABCDEFGHO 6esf_ABCDEFGH 6esg_ABCDEFGH 6esh_ABCDEFGH 6esi_ABCDEFGH 6fq5_ABCDEFGH 6fq6_ABCDEFGH 6fq8_ABCDEFGH 6ftx_ABCDEFGHW 6iro_ABCDEFGHL 6iy2_ABCDEFGHO 6iy3_ABCDEFGHO 6jm9_ABCDEFGH 6jma_ABCDEFGH 6jyl_ABCDEFGHK 6k1p_ABCDEFGHK 6nn6_ABCDEFGH 6nog_ABCDEFGH 6o96_ABCDEFGH 6om3_ABCDEFGH 6om3_LMNOPQRST 6pa7_ABCDEFGHKP 6r1t_ABCDEFGH 6r1u_ABCDEFGHK 6r25_ABCDEFGHM 6vyp_ABCDEFGHKLMN 6vyp_abcdefghklmn 6wz5_ABCDEFGH 6wz9_ABCDEFGH 6x0n_ABCDEFGHO 6x0n_PR 6x0n_abcdefgh 6y5d_ABCDEFGH 6y5d_KMNOPQRST 6zhx_ABCDEFGH 6zhy_ABCDEF 7at8_ADEFGHIJK 7e8i_ABCDEFGH 7ea5_ABCDEFGH 7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7ktq_ABCDEFGH 7oh9_ABCDEFGHKL 7oha_ABCDEFGHKL 7ohb_ABCDEFGHK 7ohc_ABCDEFGH 7otq_ABCDEFGHK 7xcr_ABCDEFGH 7xct_ABCDEFGHL 7xd0_ABCDEFGHKL 7xpx_ABCDEFGH 8cze_ABCDEFGH 8ett_ABCDEF 8etv_ABCDEF 8eu2_KLMNOP 8eue_ABCDEFHK 8euj_HMOabfhk 8g57_ABCDEFGH 8g6g_ABCDEFGH 8g6h_ABCDEFGH 8g86_ABCDEFGH 8hr1_ABCDEFGH 8siy_CDEFGHIJ 8t3t_ABCDEFGH 8t3w_ABCDEFGH 8t3y_ABCDEFGH 8t9f_ABCDEFGH 8t9h_ABCDEFGH 8thu_ABCDEFGH 8u5h_IJKMOQRS 8x7k_ABCDEFGH
reference complex	8siy_G
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ohc_A interface=3, phRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger