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3D-footprint cannot reliably estimate the specificity of 'beta and beta-prime subunits of DNA dependent RNA-polymerases', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.


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updated Fri Sep 13 14:06:24 2024
structure nameESCHERICHIA COLI TRANSCRIPTION-TRANSLATION COUPLED COMPLEX CLASS B (TTC-B) CONTAINING RFAH BOUND TO OPS SIGNAL, NUSA, MRNA WITH A 24 NT LONG SPACER, AND FMET-TRNAS IN E-SITE AND P-SITE OF THE RIBOSOME
experimentNMR
structural superfamilybeta and beta-prime subunits of DNA dependent RNA-polymerase;
sequence familyRNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase beta subunit external; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2;
multimeric complexes3iyd_ACDFGH 5nss_GJKMN 6n4c_ABCDF 6oul_IJLR 6psq_ILM 6psr_JLM 6pss_ILM 6pst_ILM 6psu_IJLM 6psv_IJLM 6psw_IJLM 6vyq_ABE 6vyr_ABE 6vys_ABE 6vyt_ABE 6vyu_ABE 6vyw_ABE 6vyx_ABE 6vyy_ABE 6vyz_ABE 6vz2_ABE 6vz5_ABE 6vzj_AE 6x6t_ABE 6x7f_ABE 6x7k_ABE 6x9q_ABE 6xas_BIJ 6xdq_ABE 6xdr_ABE 6xgf_ABE 6xii_ABE 6xij_ABE 6ztj_CDF 6ztl_CDF 6ztm_CD 6ztn_CDF 6zto_CD 6ztp_CDJ 6zu1_CD 7bef_ACDFG 7beg_BCDFG 7c17_ACDFGH 7c97_CDFK 7chw_CDFK 7dy6_CDFK 7khc_ABF 7mkd_IJLR 7mkj_IJLR 7qv9_Mb 7qv9_ce 7vwy_CDFG 7vwz_CDFGI 7w5x_ACDFK 7w5y_ACDFK 8igr_ACDGIJL
reference complex8y6u_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence