7tn2_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	COMPOSITE MODEL OF A CHD1-NUCLEOSOME COMPLEX IN THE NUCLEOTIDE-FREE STATE DERIVED FROM 2.3A AND 2.7A CRYO-EM MAPS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7swy_ABCDEFGH 7tn2_ABCDEFGHW
redundant complexes	7swy_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7tn2_D interface=1,5, RrktRkesyaiyvykvlkqvhpdtgisckamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa

  
  ------RA--       +-----------------------------6g0l_D    
                   !  
  RT--------       !                        +----9fgq_D    
                   !           +------------4 
  ----RG----       !           !            +----5x0y_G    
                   !         +-5 
  ----RA----     -10         ! !                +1zla_C    
                   !      +--6 +----------------3 
  ----RA--RA       !      !  !                  +6a5l_g    
                   !      !  ! 
  ----RT----       !      !  +-------------------8grq_A    
                   !      ! 
  ----RT----       +------9                        +8u14_G    
                          !   +--------------------1 
  ----RG----              ! +-7                    +8ox0_C    
                          ! ! ! 
  --LCRT----              +-8 +--------------------8hr1_E    
                            ! 
  ----RG----                !                     +8txv_G    
                            +---------------------2 
  ----RG----                                      +8jla_C

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updated Wed Dec 18 11:22:00 2024