Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING THE H3.1 E97K MUTANT
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8ybk_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  LT----RC------                                 +3kwq_E    
                                  +--------------1 
  ------RT------          +------11              +8grq_A    
                          !       !  
  ------RG------          !       +--------------6iy2_A    
                          !  
  LA----RG------          !                     +---------7unc_a    
                          !              +------9 
  ------RA----RA          !              !      +---------6a5l_g    
                          !           +-13  
  LT----RC------          !           !  !  +--------------4xzq_E    
                          !           !  !  !  
  ----------KG--          !           !  +-10             +7nkx_f    
                          !           !     !     +-------6 
  ------RG------          !           !     !     !       +8jla_C    
                       +-18        +-14     +-----8 
  ------RA------       !  !        !  !           !       +1zla_C    
                       !  !        !  !           +-------5 
  ------RG------       !  !        !  !                   +8ox0_C    
                       !  !     +-15  !  
  --IT----------       !  !     !  !  !                 +3wkj_D    
                       !  !     !  !  +-----------------2 
  --------RA----       !  !     !  !                    +6g0l_D    
                       !  !  +-16  !  
  QC----RG------       !  !  !  !  +-------------------7y7i_E    
                       !  !  !  !  
  ------RC------     -19  !  !  !                +---7xyf_B    
                       !  !  !  +----------------7 
  ------RT------       !  !  !                   !   +7kbd_C    
                       !  +-17                   +---3 
  ------RG------       !     !                       +5x0y_G    
                       !     !  
  ------RG------       !     !                     +7ccr_A    
                       !     !      +--------------4 
  LC----RT------       !     +-----12              +8hr1_E    
                       !            !  
  ------RT------       !            +---------------7zs9_e    
                       !  
  ----KT--------   L   +-------------------------7cvo_A    
                     

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updated Mon Aug 4 02:44:49 2025